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| GenBank Identifier | RefSeq Acc. | Name |
| 38638196 | NC_005264.1 | Psittacid herpesvirus 1 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24467 | + | 102001 | 87 | 19.5 | -24.5 | NP_944430 | 5' arm 3' arm | ||
| 24599 | - | 51815 | 90 | 19.5 | -23.6 | NP_944404 | 5' arm 3' arm | ||
| 24331 | + | 781 | 87 | 19.5 | -25.9 | 5' arm 3' arm | |||
| 24450 | + | 87575 | 90 | 19.5 | -25.3 | NP_944420 | 5' arm 3' arm | ||
| 24645 | - | 88716 | 87 | 19.5 | -25.26 | NP_944420 | 5' arm 3' arm | ||
| 24460 | + | 94461 | 90 | 19.5 | -25.7 | NP_944423 | 5' arm 3' arm | ||
| 24388 | + | 43445 | 90 | 19.5 | -20.9 | NP_944401 | 5' arm 3' arm | ||
| 24387 | + | 43215 | 90 | 19.5 | -26.7 | NP_944401 | 5' arm 3' arm | ||
| 24384 | + | 41558 | 88 | 19.5 | -23 | NP_944401 | 5' arm 3' arm | ||
| 24574 | - | 31372 | 90 | 19.5 | -21 | 5' arm 3' arm | |||
| 24694 | - | 122242 | 89 | 19.5 | -23.2 | NP_944441 | 5' arm 3' arm | ||
| 24491 | + | 121547 | 87 | 19.5 | -29.1 | NP_944452 | 5' arm 3' arm | ||
| 24649 | - | 90848 | 87 | 19.5 | -24.3 | NP_944422 | 5' arm 3' arm | ||
| 24465 | + | 96804 | 90 | 19.5 | -21.8 | NP_944425 | 5' arm 3' arm | ||
| 24374 | + | 34482 | 85 | 19.5 | -23.7 | NP_944397 | 5' arm 3' arm | ||
| 24750 | - | 152549 | 90 | 19.5 | -22.3 | 5' arm 3' arm | |||
| 24514 | + | 143960 | 90 | 19.5 | -20.7 | 5' arm 3' arm | |||
| 24482 | + | 114813 | 86 | 19.5 | -25.1 | 5' arm 3' arm | |||
| 24650 | - | 92456 | 90 | 19.5 | -20.41 | NP_944423 | 5' arm 3' arm | ||
| 24628 | - | 79689 | 89 | 19.5 | -22.1 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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