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| GenBank Identifier | RefSeq Acc. | Name |
| 38638196 | NC_005264.1 | Psittacid herpesvirus 1 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24384 | + | 41558 | 88 | 19.5 | -23 | NP_944401 | 5' arm 3' arm | ||
| 24661 | - | 98547 | 87 | 19.5 | -23.5 | NP_944427 | 5' arm 3' arm | ||
| 24707 | - | 128436 | 90 | 19.5 | -19.44 | 5' arm 3' arm | |||
| 24460 | + | 94461 | 90 | 19.5 | -25.7 | NP_944423 | 5' arm 3' arm | ||
| 24694 | - | 122242 | 89 | 19.5 | -23.2 | NP_944441 | 5' arm 3' arm | ||
| 24688 | - | 118257 | 85 | 19.5 | -23.1 | NP_944440 | 5' arm 3' arm | ||
| 24419 | + | 61041 | 86 | 19.5 | -23.9 | NP_944409 | 5' arm 3' arm | ||
| 24365 | + | 28241 | 90 | 19.5 | -19.5 | NP_944393 | 5' arm 3' arm | ||
| 24478 | + | 113147 | 90 | 19.5 | -20.5 | NP_944435 | 5' arm 3' arm | ||
| 24449 | + | 87193 | 89 | 19.5 | -21 | NP_944420 | 5' arm 3' arm | ||
| 24514 | + | 143960 | 90 | 19.5 | -20.7 | 5' arm 3' arm | |||
| 24374 | + | 34482 | 85 | 19.5 | -23.7 | NP_944397 | 5' arm 3' arm | ||
| 24483 | + | 115090 | 79 | 19.5 | -23.72 | NP_944437 | 5' arm 3' arm | ||
| 24467 | + | 102001 | 87 | 19.5 | -24.5 | NP_944430 | 5' arm 3' arm | ||
| 24465 | + | 96804 | 90 | 19.5 | -21.8 | NP_944425 | 5' arm 3' arm | ||
| 24716 | - | 133218 | 88 | 19.5 | -23.4 | NP_944442 | 5' arm 3' arm | ||
| 24750 | - | 152549 | 90 | 19.5 | -22.3 | 5' arm 3' arm | |||
| 24706 | - | 128233 | 80 | 19.5 | -19.5 | 5' arm 3' arm | |||
| 24482 | + | 114813 | 86 | 19.5 | -25.1 | 5' arm 3' arm | |||
| 24695 | - | 122455 | 90 | 19.5 | -22 | NP_944441 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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