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| GenBank Identifier | RefSeq Acc. | Name |
| 38638196 | NC_005264.1 | Psittacid herpesvirus 1 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24702 | - | 126536 | 88 | 20.5 | -27.6 | NP_944441 | 5' arm 3' arm | ||
| 24705 | - | 128040 | 87 | 22.5 | -27.5 | 5' arm 3' arm | |||
| 24741 | - | 146575 | 88 | 21 | -27.5 | NP_944450 | 5' arm 3' arm | ||
| 24530 | + | 154132 | 87 | 22.5 | -27.5 | 5' arm 3' arm | |||
| 24488 | + | 118170 | 88 | 21.5 | -27.4 | NP_944440 | 5' arm 3' arm | ||
| 24433 | + | 69415 | 90 | 22.5 | -27.32 | 5' arm 3' arm | |||
| 24725 | - | 137053 | 86 | 23.5 | -27.3 | NP_944445 | 5' arm 3' arm | ||
| 24610 | - | 63420 | 90 | 21 | -27.3 | NP_944409 | 5' arm 3' arm | ||
| 24687 | - | 117447 | 90 | 24.5 | -27.3 | NP_944440 | 5' arm 3' arm | ||
| 24464 | + | 96191 | 90 | 20 | -27.2 | NP_944425 | 5' arm 3' arm | ||
| 24398 | + | 48256 | 90 | 20 | -27.1 | NP_944403 | 5' arm 3' arm | ||
| 24377 | + | 36193 | 87 | 22 | -27.1 | NP_944398 | 5' arm 3' arm | ||
| 24438 | + | 76564 | 85 | 20 | -27.1 | 5' arm 3' arm | |||
| 24648 | - | 90502 | 90 | 20.5 | -27 | NP_944421 | 5' arm 3' arm | ||
| 24572 | - | 30327 | 86 | 19 | -27 | NP_944394 | 5' arm 3' arm | ||
| 24511 | + | 138690 | 90 | 20 | -27 | NP_944446 | 5' arm 3' arm | ||
| 24413 | + | 58066 | 90 | 21.5 | -27 | NP_944409 | 5' arm 3' arm | ||
| 24370 | + | 33356 | 90 | 24.5 | -26.9 | NP_944396 | 5' arm 3' arm | ||
| 24563 | - | 21134 | 89 | 19 | -26.9 | NP_944389 | 5' arm 3' arm | ||
| 24557 | - | 13951 | 88 | 20.5 | -26.8 | NP_944386 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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