miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
24600	-	54257	90	24.5	-28.8	NP_944406		5' arm      3' arm
24495	+	122212	90	20	-28.7	NP_944441		5' arm      3' arm
24757	-	159960	90	20	-28.7	NP_944441		5' arm      3' arm
24539	+	158850	85	20.5	-28.3	NP_944441		5' arm      3' arm
24573	-	31193	90	24	-28.3	NP_944394		5' arm      3' arm
24697	-	123322	85	20.5	-28.3	NP_944441		5' arm      3' arm
24440	+	77544	89	20	-28.1	NP_944415		5' arm      3' arm
24436	+	71906	89	21.5	-28.1	NP_944412		5' arm      3' arm
24562	-	20445	90	20	-28.07			5' arm      3' arm
24635	-	85857	90	19	-28	NP_944420		5' arm      3' arm
24681	-	113654	85	20.5	-27.9			5' arm      3' arm
24692	-	120553	88	22	-27.8			5' arm      3' arm
24543	+	161619	88	22	-27.8			5' arm      3' arm
24565	-	23462	90	19.5	-27.8	NP_944390		5' arm      3' arm
24759	-	160412	88	19	-27.8	NP_944441		5' arm      3' arm
24493	+	121760	88	19	-27.8	NP_944441		5' arm      3' arm
24359	+	24228	88	21	-27.71	NP_944391		5' arm      3' arm
24351	+	18894	87	21.5	-27.7			5' arm      3' arm
24702	-	126536	88	20.5	-27.6	NP_944441		5' arm      3' arm
24533	+	155636	88	20.5	-27.6	NP_944441		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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