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| GenBank Identifier | RefSeq Acc. | Name |
| 48697190 | NC_005887.1 | Burkholderia cepacia complex phage BcepC6B |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 28115 | - | 6234 | 90 | 21 | -25.4 | YP_024928 | 5' arm 3' arm | ||
| 28055 | + | 28203 | 90 | 21 | -33.7 | YP_024950 | 5' arm 3' arm | ||
| 28042 | + | 22566 | 87 | 21 | -25.1 | YP_024941 | 5' arm 3' arm | ||
| 28043 | + | 22714 | 89 | 21 | -21.4 | YP_024942 | 5' arm 3' arm | ||
| 28076 | + | 33185 | 89 | 21 | -22 | 5' arm 3' arm | |||
| 28073 | + | 32276 | 89 | 21 | -25.4 | YP_024953 | 5' arm 3' arm | ||
| 28011 | + | 8609 | 88 | 21.5 | -20.1 | YP_024932 | 5' arm 3' arm | ||
| 28148 | - | 21287 | 89 | 21.5 | -21 | YP_024939 | 5' arm 3' arm | ||
| 28012 | + | 8708 | 88 | 21.5 | -24.6 | YP_024932 | 5' arm 3' arm | ||
| 28001 | + | 2070 | 88 | 21.5 | -22.9 | YP_024923 | 5' arm 3' arm | ||
| 28122 | - | 8115 | 89 | 21.5 | -27.3 | YP_024931 | 5' arm 3' arm | ||
| 28154 | - | 24361 | 90 | 21.5 | -20.6 | YP_024945 | 5' arm 3' arm | ||
| 28137 | - | 16109 | 89 | 21.5 | -24.6 | YP_024936 | 5' arm 3' arm | ||
| 28124 | - | 9560 | 90 | 21.5 | -22.5 | YP_024932 | 5' arm 3' arm | ||
| 28133 | - | 13813 | 90 | 21.5 | -26.2 | 5' arm 3' arm | |||
| 28100 | + | 41437 | 90 | 21.5 | -25.3 | YP_024966 | 5' arm 3' arm | ||
| 28049 | + | 26155 | 90 | 21.5 | -25.1 | YP_024948 | 5' arm 3' arm | ||
| 28046 | + | 24625 | 90 | 21.5 | -21.8 | YP_024945 | 5' arm 3' arm | ||
| 28023 | + | 14235 | 90 | 21.5 | -22.8 | YP_024936 | 5' arm 3' arm | ||
| 28027 | + | 16288 | 89 | 21.5 | -21.9 | YP_024936 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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