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| GenBank Identifier | RefSeq Acc. | Name |
| 48697190 | NC_005887.1 | Burkholderia cepacia complex phage BcepC6B |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 28021 | + | 13977 | 90 | 20.5 | -25.6 | YP_024935 | 5' arm 3' arm | ||
| 28035 | + | 19700 | 86 | 21 | -20.3 | YP_024938 | 5' arm 3' arm | ||
| 28043 | + | 22714 | 89 | 21 | -21.4 | YP_024942 | 5' arm 3' arm | ||
| 28042 | + | 22566 | 87 | 21 | -25.1 | YP_024941 | 5' arm 3' arm | ||
| 28028 | + | 17001 | 84 | 21 | -26.7 | YP_024937 | 5' arm 3' arm | ||
| 28073 | + | 32276 | 89 | 21 | -25.4 | YP_024953 | 5' arm 3' arm | ||
| 28126 | - | 11631 | 90 | 21 | -25 | YP_024934 | 5' arm 3' arm | ||
| 28147 | - | 21178 | 90 | 21 | -31.2 | YP_024939 | 5' arm 3' arm | ||
| 28149 | - | 21412 | 87 | 21 | -20.8 | YP_024939 | 5' arm 3' arm | ||
| 28115 | - | 6234 | 90 | 21 | -25.4 | YP_024928 | 5' arm 3' arm | ||
| 28127 | - | 11771 | 85 | 21 | -22.7 | YP_024934 | 5' arm 3' arm | ||
| 28179 | - | 40704 | 89 | 21 | -19.5 | YP_024966 | 5' arm 3' arm | ||
| 28101 | + | 42062 | 88 | 21 | -21.3 | YP_024966 | 5' arm 3' arm | ||
| 28014 | + | 9602 | 90 | 21 | -23.8 | YP_024932 | 5' arm 3' arm | ||
| 28019 | + | 13562 | 90 | 21 | -20.3 | YP_024935 | 5' arm 3' arm | ||
| 27996 | + | 225 | 88 | 21 | -20.2 | YP_024921 | 5' arm 3' arm | ||
| 28045 | + | 24225 | 90 | 21 | -26.9 | YP_024945 | 5' arm 3' arm | ||
| 28155 | - | 24653 | 90 | 21 | -22.7 | YP_024945 | 5' arm 3' arm | ||
| 28153 | - | 24013 | 90 | 21 | -32.2 | YP_024945 | 5' arm 3' arm | ||
| 28040 | + | 22226 | 89 | 21 | -23.8 | YP_024940 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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