miRNA display CGI


Results 1 - 20 of 210 are showing below:
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GenBank Identifier RefSeq Acc. Name
50313241 NC_001491.2 Equid herpesvirus 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
2812 - 129818 89 33 -30.8 YP_053115 5' arm      3' arm
2801 - 117987 89 27.5 -30.6 YP_053124 5' arm      3' arm
2696 + 110069 87 27.5 -22.5 5' arm      3' arm
2726 + 145173 89 27.5 -30.6 YP_053108 5' arm      3' arm
2794 - 109045 85 26.5 -33.2 5' arm      3' arm
2778 - 74438 88 26 -31 5' arm      3' arm
2811 - 128358 90 25 -31 YP_053114 5' arm      3' arm
2622 + 370 89 25 -22 5' arm      3' arm
2685 + 94487 90 25 -20.1 YP_053097 5' arm      3' arm
2695 + 108953 82 24.5 -35 5' arm      3' arm
2749 - 30749 88 24.5 -29.69 YP_053066 5' arm      3' arm
2764 - 46023 90 24.5 -21.4 YP_053069 5' arm      3' arm
2791 - 101705 89 24.5 -22.3 YP_053100 5' arm      3' arm
2666 + 65730 89 24.5 -28 YP_053081 5' arm      3' arm
2626 + 3006 89 24 -33.2 YP_053048 5' arm      3' arm
2638 + 14128 89 24 -20.3 YP_053057 5' arm      3' arm
2775 - 64695 90 24 -21.8 YP_053079 5' arm      3' arm
2630 + 5550 87 24 -25.5 YP_053050 5' arm      3' arm
2693 + 105225 89 24 -22.2 YP_053102 5' arm      3' arm
2795 - 110716 85 24 -23.6 YP_053107 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.