miRNA display CGI


Results 1 - 20 of 210 are showing below:
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GenBank Identifier RefSeq Acc. Name
50313241 NC_001491.2 Equid herpesvirus 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
2642 + 31075 89 19 -24.4 YP_053066 5' arm      3' arm
2658 + 60139 90 19 -20.9 YP_053077 5' arm      3' arm
2771 - 60553 90 19 -22.2 YP_053077 5' arm      3' arm
2629 + 5436 89 19 -23.4 YP_053050 5' arm      3' arm
2760 - 42467 88 19 -20.4 YP_053069 5' arm      3' arm
2814 - 136364 90 19 -27.1 YP_053119 5' arm      3' arm
2790 - 98696 89 19 -23.8 YP_053098 5' arm      3' arm
2646 + 37380 85 19 -27 YP_053069 5' arm      3' arm
2657 + 58516 88 19 -19.9 YP_053076 5' arm      3' arm
2815 - 137203 87 19 -25.2 YP_053120 5' arm      3' arm
2670 + 75072 89 19 -20.5 YP_053086 5' arm      3' arm
2643 + 31749 88 19 -19.4 YP_053067 5' arm      3' arm
2792 - 106263 86 19 -25.3 YP_053103 5' arm      3' arm
2665 + 65630 90 19 -29.3 YP_053081 5' arm      3' arm
2777 - 71559 88 19 -22 YP_053085 5' arm      3' arm
2708 + 120583 90 19 -24.7 5' arm      3' arm
2623 + 657 89 19 -25.9 5' arm      3' arm
2820 - 142577 90 19 -24.7 5' arm      3' arm
2689 + 99891 90 19 -21.7 YP_053099 5' arm      3' arm
2681 + 87236 84 19 -19.4 YP_053092 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.