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| GenBank Identifier | RefSeq Acc. | Name |
| 41057066 | NC_005336.1 | Orf virus |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 25060 | + | 19366 | 89 | 24 | -21.8 | NP_957796 | 5' arm 3' arm | ||
| 25108 | + | 43656 | 87 | 24 | -22.9 | NP_957818 | 5' arm 3' arm | ||
| 25170 | + | 79959 | 90 | 24 | -24.5 | NP_957852 | 5' arm 3' arm | ||
| 25363 | - | 53872 | 88 | 24 | -24.5 | NP_957832 | 5' arm 3' arm | ||
| 25030 | + | 2614 | 90 | 24 | -20.8 | 5' arm 3' arm | |||
| 25330 | - | 36411 | 88 | 24 | -19.9 | NP_957811 | 5' arm 3' arm | ||
| 25366 | - | 55344 | 87 | 24 | -23.7 | NP_957833 | 5' arm 3' arm | ||
| 25498 | - | 137349 | 90 | 24 | -20.8 | 5' arm 3' arm | |||
| 25404 | - | 76344 | 87 | 24 | -27.8 | NP_957849 | 5' arm 3' arm | ||
| 25184 | + | 83693 | 90 | 24 | -23.6 | NP_957857 | 5' arm 3' arm | ||
| 25487 | - | 132018 | 89 | 24 | -21.9 | NP_957906 | 5' arm 3' arm | ||
| 25080 | + | 28661 | 89 | 23.5 | -23.7 | NP_957805 | 5' arm 3' arm | ||
| 25495 | - | 136410 | 89 | 23.5 | -24.2 | NP_957910 | 5' arm 3' arm | ||
| 25033 | + | 3553 | 89 | 23.5 | -24.2 | NP_957781 | 5' arm 3' arm | ||
| 25464 | - | 114852 | 88 | 23.5 | -21.4 | NP_957890 | 5' arm 3' arm | ||
| 25396 | - | 70824 | 88 | 23.5 | -24.3 | NP_957845 | 5' arm 3' arm | ||
| 25350 | - | 48690 | 90 | 23.5 | -21.2 | NP_957824 | 5' arm 3' arm | ||
| 25454 | - | 104018 | 87 | 23.5 | -28.51 | NP_957878 | 5' arm 3' arm | ||
| 25489 | - | 132728 | 90 | 23.5 | -20.1 | NP_957907 | 5' arm 3' arm | ||
| 25204 | + | 92152 | 90 | 23.5 | -20.1 | NP_957863 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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