miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
20202	-	81171	89	24.5	-22.4	NP_818207		5' arm      3' arm
19991	-	10849	89	24.5	-22.7	NP_818105		5' arm      3' arm
20123	-	56398	88	24.5	-20.3	NP_818176		5' arm      3' arm
19861	+	99289	87	24.5	-34			5' arm      3' arm
20097	-	47934	89	24.5	-20.4	NP_818168		5' arm      3' arm
19867	+	102141	89	24.5	-26.3	NP_818230		5' arm      3' arm
19989	-	10533	89	24.5	-20.2	NP_818105		5' arm      3' arm
19923	+	135848	89	24.5	-28.4	NP_818279		5' arm      3' arm
20083	-	42924	85	24.5	-24.2	NP_818167		5' arm      3' arm
20389	-	150216	90	24.5	-26.8	NP_818294		5' arm      3' arm
20225	-	89443	89	24.5	-21	NP_818216		5' arm      3' arm
20193	-	78368	88	24.5	-25.3	NP_818206		5' arm      3' arm
20090	-	46412	89	24.5	-26.1			5' arm      3' arm
20279	-	114275	89	24.5	-31.1			5' arm      3' arm
20224	-	89195	90	24	-19.4	NP_818216		5' arm      3' arm
20122	-	56005	90	24	-24.8	NP_818176		5' arm      3' arm
20395	-	152825	85	24	-21.2	NP_818298		5' arm      3' arm
20244	-	99089	89	24	-26.8			5' arm      3' arm
20272	-	112342	89	24	-19.7	NP_818246		5' arm      3' arm
20301	-	121464	89	24	-21.2	NP_818255		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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