miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
1540	+	7227	89	19	-21.9			5' arm      3' arm
1541	+	7587	86	20.5	-24.5			5' arm      3' arm
1542	+	8132	90	23	-24.6			5' arm      3' arm
1538	+	832	78	19.5	-20.5			5' arm      3' arm
1539	+	4532	90	25	-28.7			5' arm      3' arm
1548	+	23960	85	20	-20.1	NP_039952		5' arm      3' arm
1552	+	27635	87	23	-19.6		hcmv-mir-UL22A	5' arm      3' arm
1568	+	38908	86	23.5	-32.8	NP_783780		5' arm      3' arm
1566	+	37950	85	25	-24.2	NP_783780		5' arm      3' arm
1571	+	40740	89	27	-26.8	NP_039966		5' arm      3' arm
1562	+	36283	88	19	-25	NP_039963		5' arm      3' arm
1555	+	32807	82	19	-33.6	NP_039961		5' arm      3' arm
1554	+	32508	87	19	-19.9	NP_039960		5' arm      3' arm
1558	+	34069	88	20	-28.5	NP_039961		5' arm      3' arm
1560	+	34569	88	20.5	-26.3	NP_039961		5' arm      3' arm
1559	+	34283	85	20.5	-26	NP_039961		5' arm      3' arm
1556	+	33225	90	21	-26.4	NP_039961		5' arm      3' arm
1561	+	35936	90	21.5	-22.9	NP_039963		5' arm      3' arm
1557	+	33713	87	23	-19.4	NP_039961		5' arm      3' arm
1553	+	30971	86	20.5	-21.4	NP_039959		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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