miRNA display CGI


Results 1 - 20 of 35 are showing below:
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GenBank Identifier RefSeq Acc. Name
62362213 NC_006949.1 Salmonella typhimurium bacteriophage ES18 virion

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
32022 - 44172 88 26 -22.5 5' arm      3' arm
32010 + 45694 88 22.5 -22.8 5' arm      3' arm
32023 - 44295 84 19.5 -22.9 5' arm      3' arm
32025 - 46546 90 21 -23.6 5' arm      3' arm
32011 - 326 88 19 -21.5 YP_224139 5' arm      3' arm
31991 + 2314 89 20 -20.4 YP_224143 5' arm      3' arm
31992 + 4883 89 19.5 -20.6 YP_224145 5' arm      3' arm
31993 + 5241 90 20 -23.6 YP_224145 5' arm      3' arm
32012 - 7529 88 21.5 -23.7 YP_224148 5' arm      3' arm
31994 + 7724 87 22 -23.1 YP_224149 5' arm      3' arm
32013 - 8460 88 22 -19.6 YP_224151 5' arm      3' arm
32014 - 9281 87 24.5 -19.6 YP_224153 5' arm      3' arm
31995 + 10316 89 20 -20.6 YP_224155 5' arm      3' arm
32016 - 14894 87 19.5 -19.6 YP_224159 5' arm      3' arm
31997 + 14380 90 21.5 -23.9 YP_224159 5' arm      3' arm
32015 - 14353 90 19.5 -22.2 YP_224159 5' arm      3' arm
31996 + 14153 90 22.5 -23.3 YP_224159 5' arm      3' arm
31998 + 16261 89 21.5 -24.8 YP_224159 5' arm      3' arm
32017 - 17376 90 19 -24.8 YP_224161 5' arm      3' arm
32018 - 18910 90 20 -19.5 YP_224164 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.