miRNA display CGI


Results 1 - 20 of 35 are showing below:
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GenBank Identifier RefSeq Acc. Name
62362213 NC_006949.1 Salmonella typhimurium bacteriophage ES18 virion

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
32011 - 326 88 19 -21.5 YP_224139 5' arm      3' arm
32004 + 34869 89 31.5 -28.3 YP_224191 5' arm      3' arm
32005 + 35004 89 27 -21 YP_224191 5' arm      3' arm
32003 + 34777 86 20.5 -20.8 YP_224191 5' arm      3' arm
32008 + 39164 89 21 -20.2 YP_224199 5' arm      3' arm
32009 + 39658 87 20.5 -19.8 YP_224199 5' arm      3' arm
32006 + 37987 87 20 -33.9 YP_224197 5' arm      3' arm
32007 + 38796 90 20 -20.6 YP_224199 5' arm      3' arm
32010 + 45694 88 22.5 -22.8 5' arm      3' arm
32002 + 28456 87 21.5 -29.5 YP_224175 5' arm      3' arm
32001 + 25014 87 21.5 -19.4 YP_224171 5' arm      3' arm
32000 + 23380 87 23.5 -24.2 YP_224168 5' arm      3' arm
31992 + 4883 89 19.5 -20.6 YP_224145 5' arm      3' arm
31994 + 7724 87 22 -23.1 YP_224149 5' arm      3' arm
31993 + 5241 90 20 -23.6 YP_224145 5' arm      3' arm
31995 + 10316 89 20 -20.6 YP_224155 5' arm      3' arm
31996 + 14153 90 22.5 -23.3 YP_224159 5' arm      3' arm
31997 + 14380 90 21.5 -23.9 YP_224159 5' arm      3' arm
31998 + 16261 89 21.5 -24.8 YP_224159 5' arm      3' arm
31999 + 19814 89 24 -22.7 YP_224166 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.