miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
25140	+	62402	89	24.5	-35.6	NP_957837		5' arm      3' arm
25291	-	17377	89	20	-34.7	NP_957795		5' arm      3' arm
25390	-	68887	90	19	-34.1	NP_957844		5' arm      3' arm
25256	+	128175	89	22	-33.7	NP_957903		5' arm      3' arm
25172	+	80411	89	22.5	-33.5	NP_957853		5' arm      3' arm
25391	-	68995	89	20.5	-33.5	NP_957844		5' arm      3' arm
25369	-	56660	89	20	-33.3	NP_957833		5' arm      3' arm
25364	-	54718	85	22	-32.8	NP_957833		5' arm      3' arm
25309	-	27421	90	21	-32.6	NP_957802		5' arm      3' arm
25137	+	61109	89	20	-32.6	NP_957837		5' arm      3' arm
25252	+	125451	80	21	-32.5	NP_957901		5' arm      3' arm
25043	+	10600	88	20.5	-32.5	NP_957787		5' arm      3' arm
25047	+	11439	87	22	-32.4	NP_957788		5' arm      3' arm
25353	-	49628	90	22.5	-32.3	NP_957826		5' arm      3' arm
25468	-	117506	81	20	-32.2			5' arm      3' arm
25104	+	39899	87	19.5	-32.1	NP_957813		5' arm      3' arm
25334	-	38419	89	19	-31.9	NP_957813		5' arm      3' arm
25497	-	137248	89	28.5	-31.6			5' arm      3' arm
25031	+	2715	89	28.5	-31.6			5' arm      3' arm
25292	-	17504	87	21.5	-31.3	NP_957795		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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