miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
6416	+	55105	90	19.5	-23.7	NP_045330		5' arm      3' arm
6478	+	99304	90	19.5	-22.3	NP_045360		5' arm      3' arm
6411	+	50829	89	19.5	-21.4	NP_045329		5' arm      3' arm
6656	-	102544	89	19.5	-29.1	NP_045363		5' arm      3' arm
6676	-	118049	90	19.5	-26	NP_045369		5' arm      3' arm
6603	-	68968	88	19.5	-26.34			5' arm      3' arm
6445	+	78591	89	19.5	-30.2	NP_045344		5' arm      3' arm
6420	+	57218	89	19.5	-32.4	NP_045331		5' arm      3' arm
6371	+	23689	90	19.5	-21.5	NP_045319		5' arm      3' arm
6577	-	51973	89	19.5	-32.5	NP_045329		5' arm      3' arm
6614	-	79921	89	19.5	-21.3	NP_045342		5' arm      3' arm
6442	+	76187	85	19.5	-25.9			5' arm      3' arm
6507	+	126601	84	19.5	-21.8			5' arm      3' arm
6558	-	31330	90	19.5	-33.1	NP_045322		5' arm      3' arm
6354	+	9236	90	19.5	-19.6			5' arm      3' arm
6665	-	111617	84	19.5	-21.8			5' arm      3' arm
6673	-	116468	90	19.5	-21.4	NP_045368		5' arm      3' arm
6368	+	20440	89	19.5	-28.9	NP_045316		5' arm      3' arm
6647	-	96552	86	19.5	-26.3	NP_045355		5' arm      3' arm
6569	-	45352	85	19.5	-25.9	NP_045328		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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