miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
6598	-	64696	90	19	-22.5	NP_045337		5' arm      3' arm
6527	-	9941	88	19	-22.3	NP_045310		5' arm      3' arm
6351	+	7037	88	19	-22.6	NP_045306		5' arm      3' arm
6515	-	696	87	19	-22.4	NP_045303		5' arm      3' arm
6617	-	80931	87	19	-30.4	NP_045345		5' arm      3' arm
6456	+	84541	90	19	-29.6	NP_045349		5' arm      3' arm
6562	-	40228	90	19	-24.1	NP_045322		5' arm      3' arm
6660	-	108673	88	19	-25.9			5' arm      3' arm
6496	+	119230	88	19	-20.1	NP_045370		5' arm      3' arm
6355	+	10647	87	19	-20.6	NP_045311		5' arm      3' arm
6505	+	126413	74	19	-36.8			5' arm      3' arm
6490	+	115332	90	19	-23.5	NP_045367		5' arm      3' arm
6429	+	61520	90	19	-24.7	NP_045334		5' arm      3' arm
6371	+	23689	90	19.5	-21.5	NP_045319		5' arm      3' arm
6348	+	3013	90	19.5	-22.5	NP_045305		5' arm      3' arm
6372	+	24324	87	19.5	-29.4	NP_045319		5' arm      3' arm
6669	-	115135	87	19.5	-29	NP_045367		5' arm      3' arm
6673	-	116468	90	19.5	-21.4	NP_045368		5' arm      3' arm
6368	+	20440	89	19.5	-28.9	NP_045316		5' arm      3' arm
6411	+	50829	89	19.5	-21.4	NP_045329		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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