miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
6373	+	24893	89	19	-25.6	NP_045319		5' arm      3' arm
6505	+	126413	74	19	-36.8			5' arm      3' arm
6375	+	26268	89	19	-21.8	NP_045320		5' arm      3' arm
6355	+	10647	87	19	-20.6	NP_045311		5' arm      3' arm
6370	+	23333	86	19	-23.2	NP_045318		5' arm      3' arm
6680	-	120658	87	19	-32.9	NP_045371		5' arm      3' arm
6461	+	89351	87	19	-27	NP_045351		5' arm      3' arm
6383	+	31275	89	19	-24.8	NP_045322		5' arm      3' arm
6496	+	119230	88	19	-20.1	NP_045370		5' arm      3' arm
6361	+	16888	89	19	-27.8	NP_045314		5' arm      3' arm
6351	+	7037	88	19	-22.6	NP_045306		5' arm      3' arm
6490	+	115332	90	19	-23.5	NP_045367		5' arm      3' arm
6515	-	696	87	19	-22.4	NP_045303		5' arm      3' arm
6429	+	61520	90	19	-24.7	NP_045334		5' arm      3' arm
6447	+	80554	90	19	-29.1	NP_045342		5' arm      3' arm
6512	+	129545	88	19	-25.9			5' arm      3' arm
6681	-	121307	90	19	-20.7	NP_045371		5' arm      3' arm
6456	+	84541	90	19	-29.6	NP_045349		5' arm      3' arm
6455	+	84254	89	19	-22	NP_045348		5' arm      3' arm
6376	+	26629	89	19	-19.8	NP_045320		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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