miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
22428	-	5296	90	19	-25.31	NP_878203		5' arm      3' arm
22409	+	11922	82	19	-20.1	NP_878217		5' arm      3' arm
22422	-	1567	86	19	-23.4			5' arm      3' arm
22432	-	8351	88	19	-26.3	NP_878209		5' arm      3' arm
22399	+	5674	89	19	-22.2	NP_878203		5' arm      3' arm
22398	+	5530	86	19	-20.3	NP_878203		5' arm      3' arm
22424	-	2424	87	19	-21.9	NP_878200		5' arm      3' arm
22434	-	9590	90	19	-23.8	NP_878213		5' arm      3' arm
22415	+	19964	90	19	-20	NP_878224		5' arm      3' arm
22425	-	2556	89	19	-23.7	NP_878200		5' arm      3' arm
22438	-	16509	81	19.5	-19.5	NP_878220		5' arm      3' arm
22417	+	26061	88	19.5	-19.44	NP_878236		5' arm      3' arm
22439	-	16781	87	19.5	-22.4	NP_878220		5' arm      3' arm
22436	-	11955	89	19.5	-27.2	NP_878217		5' arm      3' arm
22411	+	14411	87	19.5	-21.9			5' arm      3' arm
22431	-	5989	90	19.5	-27.2			5' arm      3' arm
22441	-	18235	90	20	-20.1	NP_878224		5' arm      3' arm
22412	+	17163	89	20	-23.9	NP_878221		5' arm      3' arm
22394	+	1399	89	20	-19.8	NP_878200		5' arm      3' arm
22430	-	5895	87	20	-22.6	NP_878203		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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