miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
22414	+	19769	90	26	-29.5	NP_878224		5' arm      3' arm
22416	+	23769	88	27.5	-29.1	NP_878229		5' arm      3' arm
22420	+	27816	89	20.5	-29	NP_878237		5' arm      3' arm
22400	+	6321	88	21	-28.2	NP_878204		5' arm      3' arm
22405	+	9266	88	21.5	-28.1	NP_878212		5' arm      3' arm
22431	-	5989	90	19.5	-27.2			5' arm      3' arm
22436	-	11955	89	19.5	-27.2	NP_878217		5' arm      3' arm
22432	-	8351	88	19	-26.3	NP_878209		5' arm      3' arm
22404	+	7726	86	26.5	-26.3	NP_878208		5' arm      3' arm
22440	-	17598	90	21	-26.1			5' arm      3' arm
22407	+	9692	88	21	-25.6	NP_878213		5' arm      3' arm
22428	-	5296	90	19	-25.31	NP_878203		5' arm      3' arm
22406	+	9591	89	23	-25.3	NP_878213		5' arm      3' arm
22423	-	2022	87	20	-24.91	NP_878200		5' arm      3' arm
22419	+	26860	90	21.5	-24.7	NP_878237		5' arm      3' arm
22445	-	26408	88	21.5	-24.6	NP_878237		5' arm      3' arm
22443	-	18794	86	22.5	-23.9	NP_878224		5' arm      3' arm
22429	-	5645	88	22.5	-23.9	NP_878203		5' arm      3' arm
22412	+	17163	89	20	-23.9	NP_878221		5' arm      3' arm
22397	+	5348	88	22	-23.9	NP_878203		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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