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| GenBank Identifier | RefSeq Acc. | Name |
| 82503188 | NC_007605.1 | Human herpesvirus 4 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 33381 | + | 146755 | 90 | 30 | -19.9 | ebv-mir-BART8 | 5' arm 3' arm | ||
| 33383 | + | 147304 | 90 | 30 | -26.5 | ebv-mir-BART10 | 3' arm | ||
| 33369 | + | 139071 | 89 | 29 | -25.1 | ebv-mir-BART3 | 5' arm 3' arm | ||
| 33428 | - | 7549 | 90 | 28.5 | -28.2 | 5' arm 3' arm | |||
| 33386 | + | 148201 | 87 | 28 | -27 | ebv-mir-BART19 | 3' arm | ||
| 33273 | + | 9009 | 86 | 28 | -35 | 5' arm 3' arm | |||
| 33379 | + | 145947 | 87 | 27.5 | -20.6 | ebv-mir-BART18 | 5' arm | ||
| 33370 | + | 139214 | 87 | 27 | -26.1 | ebv-mir-BART4 | 5' arm | ||
| 33591 | - | 136425 | 86 | 26.5 | -34.3 | YP_401704 | 5' arm 3' arm | ||
| 33375 | + | 139901 | 88 | 26.5 | -32.4 | ebv-mir-BART17 | 5' arm 3' arm | ||
| 33597 | - | 139989 | 90 | 26 | -34.3 | 5' arm 3' arm | |||
| 33272 | + | 7934 | 90 | 26 | -24.2 | 5' arm 3' arm | |||
| 33430 | - | 7995 | 90 | 25.5 | -25.9 | 5' arm 3' arm | |||
| 33380 | + | 146425 | 86 | 25.5 | -25.1 | ebv-mir-BART7 | 3' arm | ||
| 33513 | - | 61879 | 89 | 25.5 | -29.2 | YP_401653 | 5' arm 3' arm | ||
| 33429 | - | 7699 | 90 | 25.5 | -25.9 | 5' arm 3' arm | |||
| 33281 | + | 42840 | 81 | 25 | -22.7 | ebv-mir-BHRF1-2 | 5' arm 3' arm | ||
| 33376 | + | 140017 | 90 | 25 | -27.6 | ebv-mir-BART6 | 5' arm 3' arm | ||
| 33541 | - | 88496 | 90 | 25 | -22.9 | YP_401671 | 5' arm 3' arm | ||
| 33387 | + | 148322 | 89 | 25 | -28.5 | ebv-mir-BART20 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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