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GenBank Identifier | RefSeq Acc. | Name |
18249864 | NC_003356.1 | Bacteriophage P27 |
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ID | strand | start position | length |
sRNA loop score![]() |
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
12742 | + | 38698 | 86 | 19 | -22.9 | NP_543106 | 5' arm 3' arm | ||
12718 | + | 11118 | 83 | 19 | -20.4 | NP_543069 | 5' arm 3' arm | ||
12747 | - | 24482 | 89 | 19 | -24.8 | NP_543090 | 5' arm 3' arm | ||
12746 | - | 24372 | 87 | 19 | -21.7 | NP_543090 | 5' arm 3' arm | ||
12741 | + | 38161 | 89 | 19 | -24.2 | NP_543105 | 5' arm 3' arm | ||
12735 | + | 31629 | 89 | 19.5 | -19.8 | NP_543099 | 5' arm 3' arm | ||
12732 | + | 29915 | 86 | 19.5 | -26.6 | NP_543096 | 5' arm 3' arm | ||
12731 | + | 28921 | 90 | 19.5 | -26.5 | NP_543095 | 5' arm 3' arm | ||
12727 | + | 27130 | 89 | 19.5 | -20.9 | NP_543092 | 5' arm 3' arm | ||
12737 | + | 33933 | 90 | 20 | -20.1 | NP_543100 | 5' arm 3' arm | ||
12749 | - | 26884 | 86 | 20 | -25.8 | NP_543092 | 5' arm 3' arm | ||
12734 | + | 31083 | 90 | 20 | -22.2 | NP_543097 | 5' arm 3' arm | ||
12751 | - | 28355 | 89 | 20 | -22.2 | NP_543094 | 5' arm 3' arm | ||
12720 | + | 19156 | 89 | 20 | -24.6 | NP_543080 | 5' arm 3' arm | ||
12752 | - | 34546 | 89 | 20.5 | -31.5 | NP_543100 | 5' arm 3' arm | ||
12748 | - | 25692 | 87 | 20.5 | -20.77 | NP_543091 | 5' arm 3' arm | ||
12722 | + | 20699 | 85 | 20.5 | -25 | NP_543084 | 5' arm 3' arm | ||
12753 | - | 37808 | 90 | 20.5 | -19.87 | NP_543104 | 5' arm 3' arm | ||
12726 | + | 25541 | 89 | 20.5 | -21.9 | NP_543091 | 5' arm 3' arm | ||
12754 | - | 41937 | 84 | 21 | -20.2 | NP_543109 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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