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| GenBank Identifier | RefSeq Acc. | Name |
| 14250967 | NC_002794.1 | Tupaia herpesvirus |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 10884 | + | 173017 | 89 | 29 | -35.5 | NP_116464 | 5' arm 3' arm | ||
| 10936 | - | 28147 | 90 | 29 | -20.52 | 5' arm 3' arm | |||
| 10931 | - | 17736 | 87 | 27.5 | -24.9 | NP_116345 | 5' arm 3' arm | ||
| 10836 | + | 138744 | 90 | 27 | -24.3 | NP_116435 | 5' arm 3' arm | ||
| 10821 | + | 131944 | 90 | 27 | -27.2 | NP_116432 | 5' arm 3' arm | ||
| 10715 | + | 14599 | 86 | 26.5 | -30.9 | NP_116339 | 5' arm 3' arm | ||
| 10882 | + | 171646 | 85 | 26.5 | -22.5 | 5' arm 3' arm | |||
| 10979 | - | 60350 | 88 | 26 | -36.9 | NP_116385 | 5' arm 3' arm | ||
| 10879 | + | 168169 | 88 | 25.5 | -25.8 | NP_116457 | 5' arm 3' arm | ||
| 10980 | - | 60870 | 89 | 25.5 | -23.2 | NP_597953 | 5' arm 3' arm | ||
| 10900 | + | 184397 | 89 | 25.5 | -25.4 | NP_116476 | 5' arm 3' arm | ||
| 10880 | + | 168366 | 89 | 25.5 | -29.1 | NP_116457 | 5' arm 3' arm | ||
| 10930 | - | 16647 | 89 | 25.5 | -36.2 | NP_116344 | 5' arm 3' arm | ||
| 11100 | - | 141082 | 90 | 25.5 | -23.5 | NP_116436 | 5' arm 3' arm | ||
| 10938 | - | 35242 | 90 | 25.5 | -24.9 | NP_116361 | 5' arm 3' arm | ||
| 10911 | + | 192451 | 88 | 25 | -23.6 | 5' arm 3' arm | |||
| 10985 | - | 63303 | 90 | 25 | -21.1 | NP_116386 | 5' arm 3' arm | ||
| 10831 | + | 136419 | 89 | 25 | -25.8 | NP_116435 | 5' arm 3' arm | ||
| 11072 | - | 106795 | 88 | 25 | -24.8 | 5' arm 3' arm | |||
| 10902 | + | 185606 | 87 | 24.5 | -22.5 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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