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| GenBank Identifier | RefSeq Acc. | Name |
| 9630966 | NC_001973.1 | Lymantria dispar nucleopolyhedrovirus |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 8060 | - | 156033 | 90 | 23.5 | -29.7 | NP_047797 | 5' arm 3' arm | ||
| 7835 | + | 155670 | 89 | 20.5 | -21.2 | NP_047796 | 5' arm 3' arm | ||
| 7833 | + | 154809 | 90 | 20 | -26.9 | NP_047795 | 5' arm 3' arm | ||
| 7834 | + | 154949 | 89 | 19 | -26.4 | NP_047795 | 5' arm 3' arm | ||
| 8058 | - | 154208 | 88 | 21.5 | -29.5 | NP_047794 | 5' arm 3' arm | ||
| 7832 | + | 153700 | 89 | 23.5 | -28.4 | NP_047794 | 5' arm 3' arm | ||
| 8057 | - | 152787 | 90 | 21.5 | -24.3 | NP_047793 | 5' arm 3' arm | ||
| 7831 | + | 152430 | 88 | 19.5 | -21.11 | NP_047793 | 5' arm 3' arm | ||
| 7828 | + | 150162 | 86 | 21 | -23.94 | NP_047792 | 5' arm 3' arm | ||
| 8056 | - | 150310 | 85 | 20 | -22.7 | NP_047792 | 5' arm 3' arm | ||
| 7829 | + | 150539 | 90 | 22 | -20.5 | NP_047792 | 5' arm 3' arm | ||
| 8041 | - | 140591 | 87 | 22 | -27.3 | NP_047791 | 5' arm 3' arm | ||
| 7827 | + | 149401 | 88 | 20.5 | -23.5 | NP_047791 | 5' arm 3' arm | ||
| 8054 | - | 149488 | 88 | 20.5 | -23.8 | NP_047791 | 5' arm 3' arm | ||
| 8049 | - | 146800 | 89 | 19 | -25.9 | NP_047789 | 5' arm 3' arm | ||
| 8050 | - | 147070 | 89 | 21 | -25.1 | NP_047789 | 5' arm 3' arm | ||
| 7824 | + | 146712 | 89 | 19.5 | -21.7 | NP_047789 | 5' arm 3' arm | ||
| 8048 | - | 146678 | 89 | 22 | -26.5 | NP_047789 | 5' arm 3' arm | ||
| 7823 | + | 146354 | 88 | 21 | -22 | NP_047788 | 5' arm 3' arm | ||
| 8047 | - | 144898 | 88 | 21 | -22.7 | NP_047786 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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