miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8523	+	115920	90	21.5	-25	NP_037878		5' arm      3' arm
8503	+	47193	88	21.5	-25.5	NP_037808		5' arm      3' arm
8496	+	35827	90	21.5	-22.4	NP_037795		5' arm      3' arm
8558	-	59701	90	21.5	-21.8	NP_037821		5' arm      3' arm
8489	+	11439	90	22	-27.7			5' arm      3' arm
8546	-	25920	90	22	-27.2	NP_037785		5' arm      3' arm
8507	+	78004	89	22	-26	NP_037837		5' arm      3' arm
8515	+	107801	81	22	-25.8	NP_037871		5' arm      3' arm
8533	-	6827	89	22.5	-24.4	NP_037765		5' arm      3' arm
8564	-	79970	90	22.5	-21	NP_037840		5' arm      3' arm
8566	-	99490	86	22.5	-23.1	NP_037860		5' arm      3' arm
8517	+	107992	90	22.5	-22	NP_037871		5' arm      3' arm
8521	+	112688	87	22.5	-25.8	NP_037874		5' arm      3' arm
8488	+	11279	89	22.5	-27.1			5' arm      3' arm
8529	-	507	89	23	-21.5	NP_037761		5' arm      3' arm
8492	+	21566	86	23	-30.9	NP_037779		5' arm      3' arm
8482	+	4429	86	23	-23.6	NP_037764		5' arm      3' arm
8502	+	46216	87	23	-21.4	NP_037806		5' arm      3' arm
8516	+	107887	90	23	-20.1	NP_037871		5' arm      3' arm
8511	+	95381	89	23	-20.5	NP_037857		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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