miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8500	+	42250	89	27	-20.7			5' arm      3' arm
8497	+	36959	89	20.5	-24.4	NP_037796		5' arm      3' arm
8498	+	39236	87	21	-20	NP_037798		5' arm      3' arm
8495	+	34861	90	21	-23.7	NP_037794		5' arm      3' arm
8496	+	35827	90	21.5	-22.4	NP_037795		5' arm      3' arm
8493	+	28046	90	19	-29.3	NP_037787		5' arm      3' arm
8494	+	30334	88	26.5	-22.6	NP_037790		5' arm      3' arm
8568	-	105133	89	25.5	-28.4			5' arm      3' arm
8566	-	99490	86	22.5	-23.1	NP_037860		5' arm      3' arm
8567	-	100700	89	20	-31.11			5' arm      3' arm
8565	-	84195	89	19	-23.6	NP_037847		5' arm      3' arm
8564	-	79970	90	22.5	-21	NP_037840		5' arm      3' arm
8569	-	105377	78	25.5	-31.5			5' arm      3' arm
8570	-	105677	89	32.5	-30.9			5' arm      3' arm
8571	-	113837	90	19.5	-20.2	NP_037875		5' arm      3' arm
8572	-	120230	85	28	-36.6			5' arm      3' arm
8574	-	129013	86	19.5	-21.3			5' arm      3' arm
8573	-	127019	88	21	-22.6	NP_037892		5' arm      3' arm
8576	-	134414	86	19	-21.8	NP_037899		5' arm      3' arm
8530	-	4321	89	19	-22.1	NP_037764		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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