miRNA display CGI


Results 21 - 36 of 36 are showing below:
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GenBank Identifier RefSeq Acc. Name
52353967 NC_000852.3 Paramecium bursaria Chlorella virus 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
759 + 208294 90 27 -22.6 NP_048785 5' arm      3' arm
762 + 210719 89 21.5 -25.2 NP_048787 5' arm      3' arm
761 + 210503 88 22 -26.4 NP_048787 5' arm      3' arm
763 + 260440 88 20.5 -19.8 NP_048896 5' arm      3' arm
783 - 257560 87 24 -23.5 NP_048896 5' arm      3' arm
764 + 270653 89 19 -22.2 NP_048919 5' arm      3' arm
784 - 283127 90 19.5 -23.4 NP_048939 5' arm      3' arm
785 - 286075 90 21 -29.6 NP_048949 5' arm      3' arm
765 + 293908 90 28 -22 NP_048971 5' arm      3' arm
767 + 301602 87 19 -25.4 NP_048981 5' arm      3' arm
766 + 301466 90 20 -24.6 NP_048981 5' arm      3' arm
768 + 306832 90 20 -20.1 NP_048991 5' arm      3' arm
786 - 310266 89 21 -20 NP_048999 5' arm      3' arm
769 + 310207 90 19 -24.1 NP_048999 5' arm      3' arm
787 - 320367 89 21.5 -21.4 NP_049022 5' arm      3' arm
788 - 323990 90 28 -22.3 NP_049037 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.