miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
782	-	244968	90	25	-22.3			5' arm      3' arm
770	+	328100	90	21.5	-22			5' arm      3' arm
781	-	218593	90	26.5	-23.9			5' arm      3' arm
771	-	3091	83	19.5	-22.3	NP_048353		5' arm      3' arm
772	-	33479	90	20.5	-24.32	NP_048408		5' arm      3' arm
753	+	81411	89	19.5	-22.4	NP_048507		5' arm      3' arm
773	-	87391	90	20	-23.8	NP_048517		5' arm      3' arm
774	-	102985	90	24	-21.7	NP_048546		5' arm      3' arm
775	-	111881	90	19.5	-21	NP_048569		5' arm      3' arm
776	-	117643	89	19.5	-19.6	NP_048585		5' arm      3' arm
754	+	117556	87	19.5	-22.5	NP_048586		5' arm      3' arm
755	+	142304	88	23	-23.4	NP_048632		5' arm      3' arm
777	-	151319	85	19	-25.5	NP_048650		5' arm      3' arm
756	+	157430	90	19.5	-22.8	NP_048670		5' arm      3' arm
757	+	158670	90	19	-21.1	NP_048673		5' arm      3' arm
778	-	161901	90	19.5	-22.8	NP_048680		5' arm      3' arm
758	+	174871	90	22.5	-28.8	NP_048709		5' arm      3' arm
779	-	179257	90	20	-24.9	NP_048720		5' arm      3' arm
780	-	197739	88	25.5	-21.5	NP_048762		5' arm      3' arm
760	+	208393	90	25	-26.8	NP_048785		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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