miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
640	-	15322	90	20.5	-22.5			5' arm      3' arm
639	-	13959	90	20	-26.7	AP_000506		5' arm      3' arm
638	-	13833	89	20.5	-20.1	AP_000506		5' arm      3' arm
637	-	13664	89	19	-25.1	AP_000506		5' arm      3' arm
636	-	13127	90	20	-27.2	AP_000506		5' arm      3' arm
635	-	12674	86	22.5	-29.7	AP_000506		5' arm      3' arm
634	-	12479	90	20.5	-24.41	AP_000506		5' arm      3' arm
633	-	11172	90	23	-29.2	AP_000505		5' arm      3' arm
632	-	10736	87	23	-36.1			5' arm      3' arm
631	-	9116	86	20.5	-25.6	AP_000504		5' arm      3' arm
630	-	6439	86	20	-22.8	AP_000503		5' arm      3' arm
629	-	5867	88	21	-20.2	AP_000503		5' arm      3' arm
628	-	2182	84	21	-29.5	AP_000499		5' arm      3' arm
627	-	1840	87	19.5	-24.4	AP_000499		5' arm      3' arm
626	+	34940	75	20	-27.8	AP_000532		5' arm      3' arm
625	+	25905	90	22	-37.3	AP_000515		5' arm      3' arm
624	+	25048	87	20.5	-23.4	AP_000515		5' arm      3' arm
623	+	24395	90	19	-21.3	AP_000515		5' arm      3' arm
622	+	23924	83	21	-32	AP_000514		5' arm      3' arm
621	+	23829	88	20	-24.6	AP_000514		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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