miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
639	-	13959	90	20	-26.7	AP_000506		5' arm      3' arm
608	+	6008	88	24.5	-26.3	AP_000503		5' arm      3' arm
652	-	26640	90	24	-26.2	AP_000517		5' arm      3' arm
607	+	5313	88	25.5	-25.9	AP_000503		5' arm      3' arm
631	-	9116	86	20.5	-25.6	AP_000504		5' arm      3' arm
600	+	351	90	22	-25.5			5' arm      3' arm
603	+	4244	81	20	-25.5	AP_000502		5' arm      3' arm
618	+	17228	88	19	-25.5	AP_000509		5' arm      3' arm
609	+	6492	89	19.5	-25.4	AP_000503		5' arm      3' arm
637	-	13664	89	19	-25.1	AP_000506		5' arm      3' arm
611	+	9733	88	22	-25	AP_000504		5' arm      3' arm
648	-	24148	89	25.5	-24.8			5' arm      3' arm
621	+	23829	88	20	-24.6	AP_000514		5' arm      3' arm
634	-	12479	90	20.5	-24.41	AP_000506		5' arm      3' arm
627	-	1840	87	19.5	-24.4	AP_000499		5' arm      3' arm
650	-	25316	89	20.5	-24.1	AP_000515		5' arm      3' arm
614	+	10440	90	21	-24	AP_000504		5' arm      3' arm
617	+	16336	88	23	-23.9	AP_000508		5' arm      3' arm
657	-	31623	89	24.5	-23.9	AP_000527		5' arm      3' arm
645	-	21378	87	22.5	-23.69	AP_000512		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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