miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
1064	+	25636	86	22	-22.5	NP_050646		5' arm      3' arm
1062	+	25314	85	21	-22.5	NP_050646		5' arm      3' arm
1055	+	11623	89	23	-22.3	NP_050628		5' arm      3' arm
1088	-	24113	89	20	-22.1			5' arm      3' arm
1067	+	27749	90	20	-21.7	NP_050648		5' arm      3' arm
1078	-	15340	89	19.5	-21.6	NP_050633		5' arm      3' arm
1059	+	18974	87	20	-21.6	NP_050636		5' arm      3' arm
1077	-	14874	86	22	-21.6	NP_050633		5' arm      3' arm
1070	+	29064	90	23	-21.42	NP_050649		5' arm      3' arm
1073	+	31028	89	21.5	-21.4	NP_050652		5' arm      3' arm
1089	-	24478	82	21.5	-21.3	NP_050646		5' arm      3' arm
1095	-	29425	89	22.5	-21	NP_050649		5' arm      3' arm
1094	-	28243	87	20.5	-21	NP_050648		5' arm      3' arm
1054	+	10955	90	19.5	-20.7	NP_050627		5' arm      3' arm
1085	-	19231	89	20.5	-20.7	NP_050638		5' arm      3' arm
1091	-	27207	88	22.5	-20.7	NP_050647		5' arm      3' arm
1076	-	14077	89	19.5	-20.6	NP_050632		5' arm      3' arm
1081	-	18533	87	20	-20.6	NP_050636		5' arm      3' arm
1087	-	22167	89	19	-20.6	NP_050643		5' arm      3' arm
1075	-	8752	90	21	-20.3	NP_050620		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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