miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9630327 NC_001895.1 Enterobacteria phage P2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
7114 + 7725 86 26.5 -27.2 NP_046766 5' arm      3' arm
7124 + 21585 90 26 -24.8 NP_046782 5' arm      3' arm
7115 + 9372 89 25.5 -28.4 5' arm      3' arm
7140 - 11666 89 24.5 -23.2 NP_046773 5' arm      3' arm
7117 + 11489 90 24 -22.4 NP_046773 5' arm      3' arm
7143 - 17684 87 23.5 -23.8 5' arm      3' arm
7138 - 9097 89 23.5 -22.8 NP_046769 5' arm      3' arm
7112 + 6875 89 23 -23.4 NP_046764 5' arm      3' arm
7151 - 23453 81 23 -23.4 NP_046784 5' arm      3' arm
7107 + 5347 88 22.5 -22.6 NP_046761 5' arm      3' arm
7127 + 28670 90 22.5 -23.7 NP_046795 5' arm      3' arm
7148 - 20611 87 22.5 -29.3 NP_046782 5' arm      3' arm
7111 + 6770 89 22 -22.4 NP_046764 5' arm      3' arm
7144 - 17947 87 22 -22.3 NP_046778 5' arm      3' arm
7122 + 19033 87 22 -27.7 NP_046779 5' arm      3' arm
7126 + 24383 87 21.5 -24.3 5' arm      3' arm
7130 - 3953 90 21.5 -28.2 NP_046759 5' arm      3' arm
7108 + 5678 88 21.5 -25.2 NP_046761 5' arm      3' arm
7103 + 3 89 21.5 -25 5' arm      3' arm
7147 - 20051 90 21 -20.5 NP_046782 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.