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| GenBank Identifier | RefSeq Acc. | Name |
| 9628600 | NC_001697.1 | Haemophilus phage HP1 |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 4229 | + | 7779 | 87 | 19.5 | -20.6 | NP_043478 | 5' arm 3' arm | ||
| 4230 | + | 21491 | 84 | 20 | -19.5 | 5' arm 3' arm | |||
| 4231 | - | 5404 | 84 | 21 | -23.6 | NP_043476 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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