miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
26253	+	437	90	19.5	-21	YP_115515		5' arm      3' arm
26261	+	4845	90	21	-24.5	NP_958248		5' arm      3' arm
26260	+	3471	88	21.5	-23			5' arm      3' arm
26254	+	641	90	21.5	-24.5	YP_115515		5' arm      3' arm
26257	+	2056	89	22	-23.8	NP_958243		5' arm      3' arm
26270	+	9374	90	20.5	-29.3	NP_958254		5' arm      3' arm
26262	+	5054	89	20	-26.7	NP_958248		5' arm      3' arm
26283	+	22828	88	20.5	-21.6	NP_958273		5' arm      3' arm
26282	+	22718	88	20.5	-25			5' arm      3' arm
26280	+	18826	89	21.5	-22.7	NP_958267		5' arm      3' arm
26278	+	17113	88	20	-24.1	NP_958266		5' arm      3' arm
26276	+	16391	90	20	-29.52	NP_958266		5' arm      3' arm
26275	+	15982	89	20	-26.6	NP_958264		5' arm      3' arm
26274	+	15609	87	20	-31.4			5' arm      3' arm
26277	+	16963	89	21.5	-31.2	NP_958266		5' arm      3' arm
26273	+	12699	87	20.5	-25.8			5' arm      3' arm
26271	+	11044	89	21	-23.2	NP_958257		5' arm      3' arm
26272	+	12543	87	25	-27.2			5' arm      3' arm
26263	+	6409	90	19	-23.3	NP_958251		5' arm      3' arm
26266	+	7392	90	20	-20.7	NP_958252		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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