miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
26343	-	6177	84	22	-27.1	NP_958250		5' arm      3' arm
26400	-	33270	87	22.5	-26.8			5' arm      3' arm
26262	+	5054	89	20	-26.7	NP_958248		5' arm      3' arm
26275	+	15982	89	20	-26.6	NP_958264		5' arm      3' arm
26353	-	12824	90	21.5	-26.6			5' arm      3' arm
26324	+	46326	90	19.5	-26.4	NP_958298		5' arm      3' arm
26332	-	2046	90	19	-26.2	NP_958243		5' arm      3' arm
26352	-	11590	89	22.5	-26.2	NP_958257		5' arm      3' arm
26338	-	4047	85	20.5	-26.2	NP_958246		5' arm      3' arm
26307	+	38257	86	21.5	-26.2	NP_958290		5' arm      3' arm
26396	-	31941	90	23	-26.1	NP_958285		5' arm      3' arm
26286	+	23724	87	19	-26.1	NP_958274		5' arm      3' arm
26289	+	25997	90	19	-26.1	NP_958276		5' arm      3' arm
26420	-	41705	90	23	-26.1	NP_958292		5' arm      3' arm
26376	-	23125	89	19.5	-26	NP_958273		5' arm      3' arm
26369	-	20914	86	19.5	-25.9			5' arm      3' arm
26273	+	12699	87	20.5	-25.8			5' arm      3' arm
26368	-	20365	87	22.5	-25.8	NP_958270		5' arm      3' arm
26318	+	41553	90	20	-25.8	NP_958292		5' arm      3' arm
26298	+	32881	89	20	-25.7	NP_958287		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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