miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
23044	+	24413	90	19	-25.2	NP_938248		5' arm      3' arm
23051	+	26684	90	19	-26.6	NP_938251		5' arm      3' arm
23045	+	24553	87	19	-23.4	NP_938248		5' arm      3' arm
23144	-	24763	90	19	-25.1	NP_938249		5' arm      3' arm
23095	-	8790	88	19	-29.1	NP_938222		5' arm      3' arm
23109	-	14309	89	19	-21.2	NP_938233		5' arm      3' arm
23152	-	27408	79	19	-21.3	NP_938252		5' arm      3' arm
23024	+	3782	89	19	-22.3	NP_938213		5' arm      3' arm
23126	-	19750	90	19.5	-28.9			5' arm      3' arm
23148	-	26024	89	19.5	-27.5	NP_938251		5' arm      3' arm
23158	-	30689	90	19.5	-29	NP_938255		5' arm      3' arm
23068	+	35951	90	19.5	-23.3	NP_938261		5' arm      3' arm
23074	-	2399	90	19.5	-20.6	NP_938212		5' arm      3' arm
23151	-	26773	90	19.5	-25.4	NP_938251		5' arm      3' arm
23022	+	1966	90	19.5	-25	NP_938211		5' arm      3' arm
23136	-	22187	90	19.5	-20.2	NP_938242		5' arm      3' arm
23058	+	31869	90	19.5	-28.4	NP_938256		5' arm      3' arm
23108	-	14209	88	19.5	-27.6	NP_938233		5' arm      3' arm
23046	+	24680	80	19.5	-26.4	NP_938249		5' arm      3' arm
23070	+	37523	89	19.5	-23.1			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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