miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
23026	+	6128	90	20	-26.2	NP_938216		5' arm      3' arm
23025	+	5233	82	20	-19.4	NP_938214		5' arm      3' arm
23027	+	6781	90	21	-20.2	NP_938217		5' arm      3' arm
23024	+	3782	89	19	-22.3	NP_938213		5' arm      3' arm
23022	+	1966	90	19.5	-25	NP_938211		5' arm      3' arm
23035	+	15411	75	21	-24.1			5' arm      3' arm
23034	+	15050	89	20.5	-24.2	NP_938233		5' arm      3' arm
23045	+	24553	87	19	-23.4	NP_938248		5' arm      3' arm
23044	+	24413	90	19	-25.2	NP_938248		5' arm      3' arm
23046	+	24680	80	19.5	-26.4	NP_938249		5' arm      3' arm
23043	+	23936	88	20	-20	NP_938248		5' arm      3' arm
23048	+	25144	90	20.5	-23.9	NP_938250		5' arm      3' arm
23047	+	24967	87	20.5	-23.4	NP_938249		5' arm      3' arm
23042	+	23487	90	20.5	-22.3	NP_938246		5' arm      3' arm
23049	+	25848	88	21	-24.9	NP_938251		5' arm      3' arm
23050	+	26164	87	22	-20.5	NP_938251		5' arm      3' arm
23041	+	22288	89	20	-24.9	NP_938243		5' arm      3' arm
23040	+	22135	89	20	-22.1	NP_938242		5' arm      3' arm
23039	+	18792	90	20.5	-28.6			5' arm      3' arm
23036	+	16564	90	19.5	-21.7	NP_938234		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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