miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
23049	+	25848	88	21	-24.9	NP_938251		5' arm      3' arm
23050	+	26164	87	22	-20.5	NP_938251		5' arm      3' arm
23041	+	22288	89	20	-24.9	NP_938243		5' arm      3' arm
23040	+	22135	89	20	-22.1	NP_938242		5' arm      3' arm
23039	+	18792	90	20.5	-28.6			5' arm      3' arm
23036	+	16564	90	19.5	-21.7	NP_938234		5' arm      3' arm
23034	+	15050	89	20.5	-24.2	NP_938233		5' arm      3' arm
23035	+	15411	75	21	-24.1			5' arm      3' arm
23037	+	16751	90	22	-27.3	NP_938234		5' arm      3' arm
23162	-	32244	87	22	-21.1	NP_938256		5' arm      3' arm
23161	-	32110	90	22	-24.4	NP_938256		5' arm      3' arm
23156	-	29091	82	21.5	-29	NP_938253		5' arm      3' arm
23159	-	30870	90	20.5	-20.7	NP_938256		5' arm      3' arm
23166	-	34736	88	20	-20.6	NP_938260		5' arm      3' arm
23170	-	37603	90	20	-22.3			5' arm      3' arm
23164	-	32724	89	21.5	-22.3	NP_938257		5' arm      3' arm
23168	-	35338	88	21.5	-28.3	NP_938260		5' arm      3' arm
23165	-	34524	90	22	-25.2	NP_938260		5' arm      3' arm
23167	-	34889	86	22	-21.6	NP_938260		5' arm      3' arm
23074	-	2399	90	19.5	-20.6	NP_938212		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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