miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8219	-	38937	90	22.5	-25.7	NP_047974		5' arm      3' arm
8207	-	32962	90	21	-20.1	NP_047961		5' arm      3' arm
8208	-	33114	88	19.5	-21.6	NP_047961		5' arm      3' arm
8156	-	1928	83	20	-22.1	NP_047924		5' arm      3' arm
8218	-	38698	90	21.5	-22.6	NP_047974		5' arm      3' arm
8221	-	39458	88	20.5	-31.4	NP_047974		5' arm      3' arm
8225	-	41245	90	19	-24.1	NP_047976		5' arm      3' arm
8224	-	40237	85	19	-25.1	NP_047974		5' arm      3' arm
8213	-	34833	89	22.5	-31.4			5' arm      3' arm
8215	-	36237	89	21	-26.9	NP_047968		5' arm      3' arm
8210	-	34109	90	22	-30.4			5' arm      3' arm
8209	-	33412	90	23	-30.8	NP_047962		5' arm      3' arm
8216	-	37490	87	22.5	-26.2	NP_047971		5' arm      3' arm
8212	-	34502	90	21.5	-21.7			5' arm      3' arm
8222	-	40016	88	21.5	-25.6	NP_047974		5' arm      3' arm
8223	-	40118	89	19	-19.5	NP_047974		5' arm      3' arm
8206	-	32403	89	21.5	-24.7			5' arm      3' arm
8214	-	35243	90	19.5	-24.2	NP_047967		5' arm      3' arm
8220	-	39074	87	21.5	-21.9	NP_047974		5' arm      3' arm
8217	-	37843	90	20.5	-26	NP_047972		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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