miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8119	+	25059	90	19	-20.2			5' arm      3' arm
8171	-	11732	87	19	-24.4	NP_047935		5' arm      3' arm
8125	+	26354	89	19	-20.2	NP_047955		5' arm      3' arm
8174	-	15555	86	19	-27	NP_047940		5' arm      3' arm
8224	-	40237	85	19	-25.1	NP_047974		5' arm      3' arm
8151	+	39243	87	19	-29.6	NP_047974		5' arm      3' arm
8138	+	33274	89	19	-22.1	NP_047962		5' arm      3' arm
8225	-	41245	90	19	-24.1	NP_047976		5' arm      3' arm
8134	+	30424	90	19	-22.62	NP_047957		5' arm      3' arm
8184	-	20525	89	19	-20.6	NP_047944		5' arm      3' arm
8108	+	21204	88	19	-20.8	NP_047944		5' arm      3' arm
8193	-	23033	87	19	-30.3			5' arm      3' arm
8159	-	5891	88	19	-25.9	NP_047927		5' arm      3' arm
8101	+	17812	88	19	-23.7	NP_047941		5' arm      3' arm
8096	+	14529	89	19	-24.9	NP_047938		5' arm      3' arm
8223	-	40118	89	19	-19.5	NP_047974		5' arm      3' arm
8076	+	5260	89	19.5	-23.1	NP_047927		5' arm      3' arm
8152	+	40624	89	19.5	-19.9			5' arm      3' arm
8113	+	22610	89	19.5	-25.4	NP_047946		5' arm      3' arm
8102	+	17943	90	19.5	-22.5	NP_047941		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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