miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
1041	-	24818	86	20	-26.3	NP_049502		5' arm      3' arm
1007	+	25278	90	20	-20.8	NP_049503		5' arm      3' arm
1008	+	25626	84	19.5	-22	NP_049503		5' arm      3' arm
1042	-	25738	89	23.5	-26.3	NP_049503		5' arm      3' arm
1010	+	26172	86	21.5	-24.9	NP_049505		5' arm      3' arm
1043	-	27953	90	20.5	-24.1	NP_049507		5' arm      3' arm
1013	+	34262	88	23	-24	NP_049513		5' arm      3' arm
1014	+	36811	89	23	-24.2	NP_049517		5' arm      3' arm
1015	+	37429	89	22.5	-22.3	NP_049518		5' arm      3' arm
1046	-	39157	88	19.5	-21	NP_049519		5' arm      3' arm
1045	-	38786	90	19	-21.5	NP_049519		5' arm      3' arm
1044	-	38499	90	21	-21	NP_049519		5' arm      3' arm
1016	+	38160	87	22	-26	NP_049519		5' arm      3' arm
1047	-	41566	89	23.5	-29.31	NP_049522		5' arm      3' arm
1017	+	40995	89	20.5	-21.2	NP_049522		5' arm      3' arm
1018	+	42527	90	21	-20.6	NP_049523		5' arm      3' arm
1019	+	42892	90	19.5	-21.5	NP_049523		5' arm      3' arm
1021	+	46818	89	20	-23.4	NP_049528		5' arm      3' arm
1022	+	47608	84	23.5	-23.6	NP_049530		5' arm      3' arm
1028	+	56199	86	20.5	-31.6	NP_049532		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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