miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
3441	+	51	89	23.5	-27.1			5' arm      3' arm
3442	+	834	85	19.5	-21.6			5' arm      3' arm
3443	+	3746	89	23	-19.6	NP_041960		5' arm      3' arm
3444	+	5219	88	22	-23.4	NP_041960		5' arm      3' arm
3445	+	8991	90	22.5	-23.3	NP_041969		5' arm      3' arm
3446	+	14440	87	19	-29.1	NP_041982		5' arm      3' arm
3447	+	16375	90	21	-21.9	NP_041982		5' arm      3' arm
3448	+	17875	90	21.5	-19.7	NP_041988		5' arm      3' arm
3449	+	18063	86	22	-19.6	NP_041988		5' arm      3' arm
3450	+	18721	90	20	-24.2	NP_041990		5' arm      3' arm
3451	+	21274	90	22	-25.3	NP_041995		5' arm      3' arm
3452	+	21740	89	21.5	-21.7	NP_041995		5' arm      3' arm
3453	+	27357	83	21.5	-20.7	NP_042001		5' arm      3' arm
3454	+	31028	90	20	-22.1	NP_042004		5' arm      3' arm
3455	+	34522	90	19.5	-21.7			5' arm      3' arm
3456	+	34999	85	21.5	-22.2	NP_042005		5' arm      3' arm
3457	+	36928	90	21.5	-25.2	NP_042008		5' arm      3' arm
3458	+	39835	88	23	-21.7			5' arm      3' arm
3459	-	11353	89	24.5	-21.9	NP_041974		5' arm      3' arm
3460	-	21193	90	20	-21.1	NP_041995		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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