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GenBank Identifier | RefSeq Acc. | Name |
9629812 | NC_001846.1 | Murine hepatitis virus strain A59 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
6339 | + | 30201 | 88 | 19.5 | -20.8 | NP_045302 | 5' arm 3' arm | ||
6340 | + | 31023 | 89 | 19 | -23.7 | 5' arm 3' arm | |||
6341 | - | 11130 | 80 | 21 | -19.8 | NP_068668 | 5' arm 3' arm | ||
6342 | - | 24976 | 80 | 19 | -19.5 | NP_045300 | 5' arm 3' arm | ||
6343 | - | 28213 | 90 | 21 | -21.1 | NP_068671 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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