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GenBank Identifier | RefSeq Acc. | Name |
9629812 | NC_001846.1 | Murine hepatitis virus strain A59 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
6323 | + | 3420 | 87 | 20 | -22.3 | NP_045298 | 5' arm 3' arm | ||
6322 | + | 2762 | 89 | 25.5 | -22.5 | NP_045298 | 5' arm 3' arm | ||
6321 | + | 2250 | 90 | 25 | -26.7 | NP_045298 | 5' arm 3' arm | ||
6320 | + | 1731 | 90 | 21.5 | -25.3 | NP_068668 | 5' arm 3' arm | ||
6319 | + | 1416 | 84 | 27 | -26.4 | NP_068668 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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