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GenBank Identifier | RefSeq Acc. | Name |
9628082 | NC_001652.1 | Infectious hematopoietic necrosis virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF |
Known viral miRNA![]() |
Match to own genomic region# | Target prediction with RNAhybrid |
4065 | + | 758 | 90 | 20 | -21.2 | NP_042676 | 5' arm 3' arm | ||
4066 | + | 2652 | 85 | 19.5 | -23.9 | NP_042678 | 5' arm 3' arm | ||
4071 | - | 10649 | 88 | 23 | -20.3 | NP_042681 | 5' arm 3' arm | ||
4070 | - | 10256 | 90 | 22 | -19.8 | NP_042681 | 5' arm 3' arm | ||
4069 | - | 9757 | 90 | 21.5 | -22.7 | NP_042681 | 5' arm 3' arm | ||
4068 | - | 4082 | 89 | 23.5 | -27.7 | NP_042679 | 5' arm 3' arm | ||
4067 | - | 846 | 88 | 21.5 | -28 | NP_042676 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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