miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
16504	-	58155	86	19.5	-20.8	NP_666015		5' arm      3' arm
16505	-	58278	89	20	-20.7	NP_666015		5' arm      3' arm
16367	+	57658	85	19.5	-21.7	NP_666014		5' arm      3' arm
16501	-	57361	90	19.5	-22.7	NP_666013		5' arm      3' arm
16503	-	57631	81	19	-22.6	NP_666013		5' arm      3' arm
16502	-	57539	88	25.5	-32.9	NP_666013		5' arm      3' arm
16500	-	57258	87	25.5	-28.2	NP_666013		5' arm      3' arm
16366	+	57397	90	20	-24	NP_666013		5' arm      3' arm
16498	-	56637	85	19	-22.7	NP_666012		5' arm      3' arm
16499	-	56777	90	22.5	-20.5	NP_666012		5' arm      3' arm
16364	+	56332	90	22.5	-21.7	NP_666012		5' arm      3' arm
16365	+	56497	90	20.5	-23.2	NP_666012		5' arm      3' arm
16363	+	55470	89	25	-30.9	NP_666011		5' arm      3' arm
16362	+	55300	80	20.5	-27.2	NP_666010		5' arm      3' arm
16497	-	55064	90	20.5	-27.42	NP_666009		5' arm      3' arm
16361	+	54525	86	19.5	-20.3	NP_666008		5' arm      3' arm
16495	-	54603	88	19	-22.2	NP_666008		5' arm      3' arm
16496	-	54845	90	20	-20.3	NP_666008		5' arm      3' arm
16493	-	54321	88	22	-29.8	NP_666007		5' arm      3' arm
16360	+	53449	89	22.5	-25.1	NP_666006		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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