miRNA display CGI


Results 21 - 40 of 258 are showing below:
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GenBank Identifier RefSeq Acc. Name
22091104 NC_004084.1 Virus PhiCh1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
16491 - 53539 89 20 -29 NP_666006 5' arm      3' arm
16359 + 53175 90 20.5 -25.1 NP_666005 5' arm      3' arm
16490 - 53217 87 21.5 -26.2 NP_666005 5' arm      3' arm
16489 - 52846 89 23 -26.2 NP_666004 5' arm      3' arm
16358 + 52677 89 21 -30.5 NP_666004 5' arm      3' arm
16486 - 52087 87 20 -25.1 NP_666002 5' arm      3' arm
16485 - 51968 90 20.5 -23.8 NP_666002 5' arm      3' arm
16488 - 52386 87 21.5 -23 NP_666002 5' arm      3' arm
16487 - 52181 88 20.5 -23.1 NP_666002 5' arm      3' arm
16356 + 51769 87 20 -20.5 NP_666002 5' arm      3' arm
16357 + 51940 88 21 -23.5 NP_666002 5' arm      3' arm
16355 + 51665 88 20.5 -25.8 NP_666002 5' arm      3' arm
16484 - 51657 90 19.5 -20.3 NP_666001 5' arm      3' arm
16354 + 51563 84 19.5 -21.2 NP_666001 5' arm      3' arm
16483 - 51518 89 19 -20.1 NP_666001 5' arm      3' arm
16352 + 50812 89 20 -20.4 NP_666000 5' arm      3' arm
16480 - 50217 90 20 -19.7 NP_666000 5' arm      3' arm
16350 + 49832 88 20 -23.6 NP_666000 5' arm      3' arm
16351 + 50297 86 19 -23.1 NP_666000 5' arm      3' arm
16481 - 50423 88 22.5 -29.1 NP_666000 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.