miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
16289	+	19030	88	20	-21.26	NP_665945		5' arm      3' arm
16290	+	19384	90	21	-26.8	NP_665946		5' arm      3' arm
16291	+	19567	88	21.5	-19.6	NP_665946		5' arm      3' arm
16292	+	20075	90	21	-22.8	NP_665947		5' arm      3' arm
16293	+	20409	89	19.5	-24.1	NP_665948		5' arm      3' arm
16294	+	21579	90	19	-33.8	NP_665949		5' arm      3' arm
16295	+	21691	87	20.5	-23.9	NP_665949		5' arm      3' arm
16296	+	21847	89	26	-23.7	NP_665949		5' arm      3' arm
16297	+	22412	89	20	-24.4			5' arm      3' arm
16298	+	22983	89	19.5	-23.9			5' arm      3' arm
16299	+	23286	90	19.5	-22.4	NP_665952		5' arm      3' arm
16300	+	23574	90	20	-25.5	NP_665952		5' arm      3' arm
16301	+	25240	90	21.5	-23.3	NP_665953		5' arm      3' arm
16302	+	25475	89	24	-22.6	NP_665953		5' arm      3' arm
16303	+	26571	89	20.5	-22.2	NP_665954		5' arm      3' arm
16304	+	27376	90	23	-26.7	NP_665955		5' arm      3' arm
16305	+	28276	90	22	-33.3	NP_665957		5' arm      3' arm
16306	+	28491	79	22.5	-21.1	NP_665957		5' arm      3' arm
16307	+	28597	89	19.5	-24.3	NP_665958		5' arm      3' arm
16308	+	29083	88	19	-23.5	NP_665958		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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