miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
16309	+	29202	90	24	-34.9	NP_665959		5' arm      3' arm
16310	+	29322	88	21.5	-20	NP_665959		5' arm      3' arm
16311	+	29610	90	21	-29.31	NP_665959		5' arm      3' arm
16312	+	29726	89	20.5	-20.9	NP_665959		5' arm      3' arm
16313	+	30599	90	21	-22.8	NP_665962		5' arm      3' arm
16314	+	31305	90	22	-27.4	NP_665963		5' arm      3' arm
16315	+	31787	83	24	-21.6			5' arm      3' arm
16316	+	32005	88	19	-26.9	NP_665964		5' arm      3' arm
16317	+	32416	89	20	-21.41	NP_665964		5' arm      3' arm
16318	+	33565	89	25	-22.1			5' arm      3' arm
16319	+	34110	90	19	-31.6			5' arm      3' arm
16320	+	34690	87	22.5	-28	NP_665970		5' arm      3' arm
16321	+	34902	90	20	-22.8	NP_665970		5' arm      3' arm
16322	+	35301	88	22.5	-29	NP_665971		5' arm      3' arm
16323	+	35516	90	20.5	-24.4			5' arm      3' arm
16324	+	36607	89	20	-21.8	NP_665972		5' arm      3' arm
16325	+	37132	86	19.5	-28.3	NP_665972		5' arm      3' arm
16326	+	38486	90	19	-23.6	NP_665974		5' arm      3' arm
16327	+	39045	83	19	-26.1	NP_665975		5' arm      3' arm
16328	+	39822	89	21.5	-20.4	NP_665976		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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