miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
32272	+	15942	90	19.5	-22.9	YP_239002		5' arm      3' arm
32273	+	33921	90	19.5	-26.9	YP_239029		5' arm      3' arm
32274	+	43200	84	24.5	-21	YP_239040		5' arm      3' arm
32275	+	44669	87	24	-29	YP_239042		5' arm      3' arm
32276	+	56354	86	19.5	-21.4	YP_239071		5' arm      3' arm
32277	+	90363	88	23.5	-24	YP_239137		5' arm      3' arm
32278	+	109637	90	19	-24.8	YP_239181		5' arm      3' arm
32279	+	136927	90	20.5	-26.4			5' arm      3' arm
32280	+	146957	87	20.5	-21.8	YP_239219		5' arm      3' arm
32281	+	151135	83	24.5	-21.7	YP_239230		5' arm      3' arm
32282	+	152987	89	20	-20.2	YP_239232		5' arm      3' arm
32283	+	169614	87	22	-19.7	YP_239255		5' arm      3' arm
32284	+	176058	88	19.5	-25.2	YP_239258		5' arm      3' arm
32285	-	2019	89	19	-21.1	YP_238977		5' arm      3' arm
32286	-	67387	90	21	-20.7			5' arm      3' arm
32287	-	70459	84	19	-23	YP_239095		5' arm      3' arm
32288	-	78971	89	22	-19.5	YP_239112		5' arm      3' arm
32289	-	83881	87	23.5	-24.2	YP_239123		5' arm      3' arm
32290	-	97088	90	20	-19.6			5' arm      3' arm
32291	-	104928	84	19	-19.6	YP_239177		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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