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| GenBank Identifier | RefSeq Acc. | Name |
| 9627210 | NC_001550.1 | Mason-Pfizer monkey virus |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 3342 | + | 7904 | 89 | 20.5 | -23.2 | 5' arm 3' arm | |||
| 3343 | + | 8256 | 88 | 20 | -31.1 | 5' arm 3' arm | |||
| 3348 | - | 8334 | 89 | 20 | -21.4 | 5' arm 3' arm | |||
| 3346 | - | 2501 | 90 | 24 | -22.8 | NP_056892 | 5' arm 3' arm | ||
| 3345 | - | 1623 | 87 | 21 | -26.8 | NP_056892 | 5' arm 3' arm | ||
| 3344 | - | 1152 | 88 | 19 | -26.5 | NP_056892 | 5' arm 3' arm | ||
| 3347 | - | 6102 | 85 | 19.5 | -20.2 | NP_056894 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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